Rfam FTP Site¶
The following list describes a few of the important files in the Rfam FTP site. Some of these files may be very large (of the order of several hundred megabytes). Please check the sizes before trying to download them over a slow connection.
Sequences, Alignments, Models and Trees¶
- Rfam covariance models in ascii INFERNAL format
- Annotated seed alignments in STOCKHOLM format
- Annotated tree files for each seed alignment
- List of sequence regions making up the full family membership for each family
- Directory containing the sequences for all significant hits per family